Publications 2016

Belyy A, Raoux-Barbot D, Saveanu C, Namane A, Ogryzko V, Worpenberg L, David V, Henriot V, Fellous S, Merrifield C, Assayag E, Ladant D, Renault L, Mechold U.
Actin activates Pseudomonas aeruginosa ExoY nucleotidyl cyclase toxin and ExoY-like effector domains from MARTX toxins.
remerciements dans Nat. Commun. 7, 13582. doi : 10.1038/ncomms13582. LC-MS identification and quantification of proteins captured by TAP-tag (AP-MS).

Naissant B, Dupuy F, Duffier Y, Lorthiois A, Duez J, Scholz J, Buffet P, Merckx A, Bachmann A, Lavazec C.
Plasmodium falciparum STEVOR phosphorylation regulates host erythrocyte deformability enabling malaria parasite transmission.
Remerciements in Blood 127:e42-e53. doi:10.1182/blood-2016-01-690776. Analyse de partenaires issus de Co-IP.

Ohlmann P, Hechler B, Chafey P, Ravanat C, Isola H, Wiesel ML, Cazenave JP, Gachet C.
Hemostatic properties and protein expression profile of therapeutic apheresis plasma treated with amotosalen and ultraviolet A for pathogen inactivation.
Transfusion  ;56(9):2239-47. doi : 10.1111/trf.13670. 2D DIGE quantitative proteome analysis.

Mouchi V, Lartaud F, Guichard N, Immel F, de Rafélis M, Broussard C, Crowley Q, Marin F.
Chalky versus foliated : a discriminant immunogold labelling of shell microstructures in the edible oyster Crassostrea gigas.
Marine Biology 163:256. doi 10.1007/s00227-016-3040-6. Identifications de protéines issues de SDS PAGE.

Ohayon D, De Chiara A, Chapuis N, Candalh C, Mocek J, Ribeil J-A, Haddaoui L, Ifrah N, Hermine O, Bouillaud F, Frachet P, Bouscary D, Witko-Sarsat V.
Cytoplasmic proliferating cell nuclear antigen connects glycolysis and cell survival in acute myeloid leukemia.
Remerciements dans Scientific Reports 6, Article number : 35561 (2016). doi:10.1038/srep35561. Affinity purification-MS ou identification de protéines partenaires par Co-ImmunoPurification.

Tiotiu A, Brazdova A, Longé C, Gallet P, Morisset M, Leduc V, Hilger C, Broussard C, Couderc R, Sutra JP, Sénéchal H, Poncet P.
Urtica dioica pollen allergy : clinical, biological and allergomics analysis. 
Annals of Allergy, Asthma & Immunology . Volume 117, Issue 5, November 2016, Pages 527–534. doi:10.1016/j.anai.2016.09.426. Identifications de protéines issues de SDS PAGE.

Régent A, Ly K, Lofek S, Clary G, Tamby M, Tamas N, Federici C, Broussard C, Chafey P, Liaudet-Coopman E, Humbert M, Perros F, Mouthon L.
Proteomic analysis of vascular smooth muscle cells in physiological condition and in pulmonary arterial hypertension : toward contractile versus synthetic phenotypes. 
Proteomics. doi : 10.1002/pmic.201500006. 2D-DIGE.

Emilie-Fleur Gautier, Sarah Ducamp, Marjorie Leduc, Virginie Salnot, François Guillonneau, Michael Dussiot, John Hale, Marie-Catherine Giarratana, Anna Raimbault, Luc Douay, Catherine Lacombe, Narla Mohandas, Frédérique Verdier, Yael Zermati, Patrick Mayeux.
Comprehensive Proteomic Analysis of Human Erythropoiesis.
Cell Reports 16(5):1470-1484, doi:10.1016/j.celrep.2016.06.085. Analyse quantitative globale des changements cellulaires par label-free absolute quantification et iTRAQ. Voir aussi le focus sur le site de l’institut Cochin.

Gwladys I. Bertin, Audrey Sabbagh, Nicolas Argy, Virginie Salnot, Sem Ezinmegnon, Gino Agbota, Yélé Ladipo, Jules M. Alao, Gratien Sagbo, François Guillonneau, Philippe Deloron
Proteomic analysis of Plasmodium falciparum parasites from patients with cerebral and uncomplicated malaria
Scientific Reports Jun 1 ;6:26773. doi : 10.1038/srep26773. Comparaison de contenus en protéines issues d’hématies parasitées.

Maravic A, Cvjetan S, Konta M, Ladouce R, Martin F.A.
Proteomic response of a β-lactamases-producing Enterobacter cloacae complex strain to cefotaxime-induced stress. 
Remerciements dans Pathogens and Disease. doi : 10.1093/femspd/ftw045. Identifications de protéines issues de 2D-DIGE.

Nikolic A, Peric M, Ladouce R, Mikecin A.M, Martin F.A, Kralj M, Krisko A and Radman M.
Death by UVC Light Correlates with Protein Damage in Isogenic Human Tumor Cells : Primary Tumor SW480 versus its Metastasis SW620. 
Journal of Proteomics & Computational Biology 2(1), 12. Identifications de protéines issues de 2D-DIGE.

Hichem Lahouassa, Marie-Lise Blondot, Lise Chauveaud, Ghina Chouguia, Marina Morela, Marjorie Leduc, François Guillonneau, Bertha Cecilia Ramirez, Olivier Schwartz and Florence Margottin-Goguet.
HIV-1 Vpr degrades the HLTF DNA translocase in T cells and macrophages.
Proc Natl Acad Sci U S A 113(19):5311-6. doi:10.1073/pnas.1600485113. Analyse quantitative relative par SILAC Voir aussi le focus sur le site de l’institut Cochin.

Immel F, Broussard C, Catherinet B, Plasseraud L, Alcaraz G, Bundeleva I and Marin F.
The shell of the invasive bivalve species Dreissena polymorpha : biochemical, elemental and textural investigations.
PLOS ONE. doi:10.1371/journal.pone.0154264.

Berthelot V, Mouta-Cardoso G, Hégarat N, Guillonneau F, François JC, Giovannangeli C, Praseuth D, and Rusconi F
The human DNA ends proteome uncovers an unexpected entanglement of functional pathways.
Nucl. Acids Res. 44(10):4721-33. doi:10.1093/nar/gkw121. Identification de composition de complexes proteiques issus de BN PAGE.

Pieri L, Chafey P, Le Gall M, Clary G, Melki R, Redeker V.
Cellular response of human neuroblastoma cells to α-synuclein fibrils, the main constituent of Lewy bodies.
Biochim Biophys Acta . 2016 Jan ;1860(1 Pt A):8-19. doi:10.1016/j.bbagen.2015.10.007.

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