Publications 2019

Lorès P, Dacheux D, Kherraf ZE, Nsota Mbango JF, Coutton C, Stouvenel L, Ialy-Radio C, Amiri-Yekta A, Whitfield M, Schmitt A, Cazin C, Givelet M, Ferreux L, Fourati Ben Mustapha S, Halouani L, Marrakchi O, Daneshipour A, El Khouri E, Do Cruzeiro M, Favier M, Guillonneau F, Chaudhry M, Sakheli Z, Wolf JP, Patrat C, Gacon G, Savinov SN, Hosseini SH, Robinson DR, Zouari R, Ziyyat A, Arnoult C, Dulioust E, Bonhivers M, Ray PF, Touré A.
Mutations in TTC29, encoding an evolutionary conserved axonemal protein, result in asthenozoospermia and male infertility.
Am J Hum Genet Dec 5;105(6):1148-1167. doi : 10.1016/j.ajhg.2019.10.007. Identification and label free quantification of axonemal proteins from purified flagella preparations.

Barbosa da Cruz D, Helms J, Aquino LR, Stiel L, Cougourdan L, Broussard C, Chafey P, Riès-Kautt M, Meziani F, Toti F, Gaussem P, Anglés-Cano E.
DNA-bound elastase of Neutrophil Extracellular Traps degrades plasminogen and affects the potential for fibrinolysis by reducing plasmin formation.
FASEB Journal. 2019 Nov 4. doi : 10.1096/fj.201901363RRR. Décryptage des fragments du plasminogen par l’elastase lors de la formation de NET in vitro.

Ohayon D, De Chiara A, My-Chan Dang P, Thieblemont N, Chatfield S, Marzaioli V, Burgener SS, Mocek J, Candalh C, Pintard C, Tacnet-Delorme P, Renault G, Lagoutte I, Favier M, Walker F, Hurtado-Nedelec M, Desplancq D, Weiss E, Benarafa C, Housset D, Marie JC, Frachet P, El-Benna J, Witko-Sarsat V.
Cytosolic PCNA interacts with p47phox and control NADPH oxidase NOX2 activation in neutrophils.
Remerciements dans J Exp Med. 2019 Dec 2 ;216(12):2900. doi : 10.1084/jem.2018037111082019c. Identifications de protéines se fixant a PCNA par AP-MS. Lisez le focus sur le site de l’institut Cochin.

Virion Z, Doly S, Saha K, Lambert M, Guillonneau F, Bied C, Duke RM, Rudd PM, Robbe-Masselot C, Nassif X, Coureuil M, Marullo S.
Sialic acid-mediated mechanical activation of β2 adrenergic receptors by bacterial pili.
Nat. Comm. 2019 Oct 18 ;10(1):4752. doi : 10.1038/s41467-019-12685-6. Selective digestion, enrichment and detection of Sialic acid-bearing β2-AR peptides. Lisez le focus sur le site de l’institut Cochin.

Caillet J, Baron B, Boni IV, Caillet-Saguy C, Hajnsdorf E.
Identification of protein-protein and ribonucleoprotein complexes containing Hfq.
Remerciements dans Sci Rep. 2019 Oct 1 ;9(1):14054. doi : 10.1038/s41598-019-50562-w . Analyse comparative de protéines se fixant a Hfq par AP-MS

Delort, F., Segard, B.-D., Hakibilen, C., Bourgois-Rocha, F., Cabet, E., Vicart P, Huang ME, Clary G, Lilienbaum A, Agbulut O, Batonnet-Pichon S.
Alterations of redox dynamics and desmin post-translational modifications in skeletal muscle models of desminopathies.
Exp Cell Res. 2019 Oct 15 ;383(2):111539. doi : 10.1016/j.yexcr.2019.111539. 2D Gel electrophoresis separation of protein isoforms.

Bondu S, Alary AS, Lefèvre C, Houy A, Jung G, Lefebvre T, Rombaut D, Boussaid I, Bousta A, Guillonneau F, Perrier P, Alsafadi S, Wassef M, Margueron R, Rousseau A, Droin N, Cagnard N, Kaltenbach S, Winter S, Kubasch AS, Bouscary D, Santini V, Toma A, Hunault M, Stamatoullas A, Gyan E, Cluzeau T, Platzbecker U, Adès L, Puy H, Stern MH, Karim Z, Mayeux P, Nemeth E, Park S, Ganz T, Kautz L, Kosmider O, Fontenay M.
A variant erythroferrone disrupts iron homeostasis in SF3B1-mutated myelodysplastic syndrome.
Science Translational Medicine 2019 Jul 10 ;11(500). pii : eaav5467. doi : 10.1126/scitranslmed.aav5467. Analyse protéogénomique ciblée de peptides modifiés chez des patients ayant une altération du splicing alternatif. Brevet EP19305047.3.  Date de dépôt : 16/01/2019 Lisez le focus sur le site de l’institut Cochin.

Chaigne B, Clary G, Le Gall M, Dumoitier N, Fernandez C, Lofek S, Chafey P, Moinzadeh P, Krieg T, Denton CP, Mouthon L.
Proteomic analysis of human scleroderma fibroblasts response to transforming growth factor-ß.
J Proteomics – Clinical Applications 2019 Jul;13(4):e1800069. doi : 10.1002/prca.201800069. 2D-DIGE et bioanalysis.

Pagnout C, Sohm B, Razafitianamaharavo A, Caillet C, Offroy M, Leduc M, Gendre H, Jomini S, Beaussart A, Bauda P, Duval JFL.
Pleiotropic effects of rfa-gene mutations on Escherichia coli envelope properties.
Scientific Reports 2019 Jul 4 ;9(1):9696. doi : 10.1038/s41598-019-46100-3. Analyse quantitative relative globale par “iTRAQ”.

Kamaliddin C, Rombaut D, Guillochon E, Royo J, Ezinmegnon S, Agbota G, Huguet S, Guemouri S, Peirera C, Coppée R,Broussard C, Alao J, Aubouy A, Guillonneau F, Deloron P, Bertin G.
From genomic to LC-MS/MS evidence : analysis of PfEMP1 in Benin malaria cases.
Plos One 2019 Jun 28 ;14(6):e0218012. doi : 10.1371/journal.pone.0218012. eCollection 2019. Analyse protéogénomique chez des patients génotypés atteints de Malaria.

Demarta-Gatsi C, Rivkin A, Di Bartolo V, Peronet R, Ding S, Commere PH, Guillonneau F, Bellalou J, Brûlé S, Abou Karam P, Cohen SR, Lagache T, Janse CJ, Regev-Rudzki N, Mécheri S.
Histamine releasing factor and elongation factor 1 alpha secreted via malaria parasites extracellular vesicles promote immune evasion by inhibiting specific T cell responses.
Cell Microbiol. 2019 Mar 5:e13021. doi : 10.1111/cmi.13021. Extracellular vesicles analysis.

Everts-Graber J, Martin KR, Thieblemont N, Mocek J, Roccabianca A, Chafey P, Le Gall M, Tacnet-Delorme P, Reutelingsperger CP, Naccache JM, Bonnotte B, Karras A, Puéchal X, Guillevin L, Terrier B, Frachet P, Perretti M, Mouthon L, Witko-Sarsat V.
Proteomic analysis of neutrophils in ANCA-associated vasculitis reveals a dysregulation in proteinase 3-associated proteins such as annexin-A1 involved in apoptotic cell clearance.
Kidney Int. 2019 Aug;96(2):397-408. doi : 10.1016/j.kint.2019.02.017.

Mouasni S, Gonzalez V, Schmitt A, Bennana E, Guillonneau F, Mistou S, Avouac J, Ea HK, Devauchelle V, Gottenberg JE, Chiocchia G, Tourneur L.
The classical NLRP3 inflammasome controls FADD unconventional secretion through microvesicle shedding.
Cell Death Dis. 2019 Feb 25 ;10(3):190. doi : 10.1038/s41419-019-1412-9. Extracellular vesicles analysis.

Oudot C, Gomes A, Nicolas V, Le Gall M, Chafey P, Broussard C, Calamita G, Mastrodonato M, Gena P, Perfettini JL, Hamelin J, Lemoine A, Fischmeister R, Vieira H, Santos C, Brenner C.
CSRP3 Mediates Polyphenols-Induced Cardioprotection In Hypertension.
The Journal of Nutritional Biochemistry . 2019 Apr ;66:29-42. doi : 10.1016/j.jnutbio.2019.01.001. 2D-DIGE.

Gomez-Zepeda D, Taghi M, Smirnova M, Sergent P, Liu WQ, Chhuon C, Vidal M, Picard M, Thioulouse E, Broutin I, Guerrera IC, Scherrmann JM, Parmentier Y, Decleves X, Menet MC.
LC-MS/MS-based quantification of efflux transporter proteins at the BBB.
Remerciements de 3P5-Cochin dans J Pharm Biomed Anal. 2019 Feb 5 ;164:496-508. doi : 10.1016/j.jpba.2018.11.013. Self explanatory title + MALDI MS.

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